Publications
Supported by NSF CCI grant
] . Nucleotide dependent lateral and longitudinal interactions in microtubules. J. Mol. Biol. Submitted.
. Coarse-graining Methods for Computational Biology. Annu. Rev. Biophysics. In Press.
. Coarse-Graining of Proteins Based on Elastic Network Models. Chem. Phys. In Press.
. Minimizing Memory as an Objective for Coarse-Graining. J. Chem. Phys. In Press.
. Molecular Origins of Cofilin-linked Changes in Actin Filament Mechanics. J. Mol. Biol. In Press.
. The Role of Amino Acid Sequence in the Self-Association of Therapeutic Monoclonal Antibodies: Insights from Coarse-grained Modeling. J. Phys. Chem. B. 2013;117(5):1269-1279.
. Theory of Ultra Coarse-Graining. I. General Principles. J. Chem. Theor. Comp. [Internet]. 2013. Available from: http://pubs.acs.org/doi/pdf/10.1021/ct4000444
. Coarse-Grained Modeling of the Self-Association of Therapeutic Monoclonal Antibodies. J. Phys. Chem. B. 2012;116(28):8045-8057.
. Coarse-graining of multiprotein assemblies. Curr. Opin. Struc. Biol. 2012;22(2):144-150.
. Coarse-Graining Provides Insights on the Essential Nature of Heterogeneity in Actin Filaments. Biophys. J. 2012;103(6):1334-1342.
. Comparison between Actin Filament Models: Coarse-Graining Reveals Essential Differences. Structure. 2012;20(4):641-653.
. Optimal Number of Coarse-Grained Sites in Different Components of Large Biomolecular Complexes. J. Phys. Chem. B. 2012;116(29):8363-8374.
. Steered transition path sampling. J. Chem. Phys. 2012;136(23):234103-234114.